Basic Information
Locus ID:
evm.TU.LG13.186
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
DRM2
Description:
DNA (cytosine-5)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 1598979 | 1601965 | - | evm.TU.LG13.186 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.65 | 65,638.96 Da | 44.13 | 76.50 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 463 | 582 | 2.9E-9 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 462 | 582 | 2.9E-17 | IPR029063 |
| SUPERFAMILY | SSF46934 | UBA-like | 45 | 92 | 1.91E-5 | IPR009060 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 264 | 459 | 1.23E-21 | IPR029063 |
| Gene3D | G3DSA:1.10.8.10 | - | 38 | 95 | 3.6E-7 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 457 | 586 | 4.0E-27 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 127 | 183 | 6.9E-6 | - |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 257 | 350 | 7.1E-7 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 52 | 93 | 9.92031 | IPR015940 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 137 | 180 | 9.366076 | IPR015940 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 257 | 586 | 126.573654 | IPR030380 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 135 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_021727470.1 | DNA (cytosine-5)-methyltransferase DRM2-like [Chenopodium quinoa] | 0 |
| Q10SU5 | DNA (cytosine-5)-methyltransferase DRM2 OS=Oryza sativa subsp. japonica OX=39947 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LJC0 | DNA (Cytosine-5)-methyltransferase DRM2 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology