Basic Information
Locus ID:
evm.TU.LG13.1541
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 35176989 | 35180482 | + | evm.TU.LG13.1541 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 99,362.36 Da | 39.22 | 88.42 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 580 | 853 | 7.6694E-92 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 324 | 362 | 0.056 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 63 | 0.0031 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 148 | 3.8E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 385 | 426 | 5.1E-8 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 577 | 846 | 1.7E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 341 | 433 | 9.78E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 547 | 850 | 9.19E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 35 | 302 | 8.16E-44 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 537 | 651 | 2.8E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 321 | 2.9E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 325 | 450 | 1.3E-32 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 652 | 872 | 2.1E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 186 | 209 | 80.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 112 | 135 | 0.0016 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 413 | 435 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 389 | 412 | 25.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 574 | 854 | 3.9E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 574 | 854 | 41.149033 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 580 | 602 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 699 | 711 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010673522.1 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology