Basic Information
Locus ID:
evm.TU.LG13.116
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 953239 | 959075 | - | evm.TU.LG13.116 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 66,776.42 Da | 55.51 | 89.49 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 44 | 132 | 2.4E-16 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 344 | 484 | 9.0E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 315 | 551 | 2.73E-42 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 330 | 546 | 3.1E-48 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 34 | 134 | 2.7E-16 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 150 | 261 | 9.2E-8 | IPR038408 |
| SMART | SM00220 | serkin_6 | 224 | 520 | 8.1E-6 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 146 | 263 | 8.631628 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 153 | 539 | 20.541662 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 135 | 15.411651 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 370 | 382 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24550.1 | proline extensin-like receptor kinase 1. encodes an ortholog of Brassica napus proline extensin-like receptor kinase. Expression of the brassica gene is induced by wounding and fungal infection. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LV48 | Proline-rich receptor-like protein kinase PERK1 OS=Arabidopsis thaliana OX=3702 GN=PERK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L1H1 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |