Basic Information
Locus ID:
evm.TU.LG13.101
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 841086 | 843314 | - | evm.TU.LG13.101 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.63 | 55,697.73 Da | 38.77 | 82.59 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 238 | 271 | 2.2E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 279 | 373 | 2.75E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 238 | 273 | 1.96E-6 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 437 | 2.6E-9 | IPR032675 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 478 | 498 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G26000.1 | Ribonuclease inhibitor. | 0 |
| RefSeq | XP_021647467.1 | F-box protein SKIP14-like [Hevea brasiliensis] | 0 |
| Q9LU91 | F-box protein SKIP14 OS=Arabidopsis thaliana OX=3702 GN=SKIP14 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EIN9 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology