Basic Information
Locus ID:
evm.TU.LG12.899
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 20250905 | 20256322 | - | evm.TU.LG12.899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 109,690.35 Da | 34.07 | 100.69 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 115 | 136 | 1.1 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 570 | 590 | 1.1 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 138 | 197 | 7.4E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 22 | 62 | 3.6E-10 | IPR013210 |
| Pfam | PF00560 | Leucine Rich Repeat | 548 | 569 | 1.6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 685 | 916 | 7.5E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 51 | 371 | 4.19E-61 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 674 | 972 | 3.78E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 308 | 605 | 2.47E-46 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 308 | 2.5E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 20 | 171 | 6.0E-43 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 667 | 780 | 7.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 781 | 990 | 4.8E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 172 | 234 | 1.2E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 309 | 614 | 3.2E-82 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 137 | 161 | 45.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 958 | 2.9E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 185 | 210 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 89 | 113 | 41.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 545 | 568 | 90.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 234 | 258 | 210.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 547 | 570 | 7.095899 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 976 | 35.255154 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 825 | 837 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 712 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_031286425.1 | receptor-like protein kinase HSL1 [Pistacia vera] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GGE5 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g001867mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology