HalophFGD

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Basic Information
Locus ID: evm.TU.LG12.619
Species & Taxonomic ID: Nitraria sibirica & 357931
Genome Assembly:
Description: F-box-like
Maps and Mapping Data
Chromosome Start End Strand ID
LG12 17065160 17066197 - evm.TU.LG12.619
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.60 39,713.95 Da 43.52 86.52 -0.29
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF81383 F-box domain 16 62 1.57E-6 IPR036047
SMART SM00256 fbox_2 16 56 0.0023 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT5G65850.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_052180944.1 putative F-box protein At3g52320 [Diospyros lotus] 0
Swiss-Prot Q9FHP3 F-box protein At5g65850 OS=Arabidopsis thaliana OX=3702 GN=At5g65850 PE=2 SV=1 0
TrEMBL A0A1Q3B6N8 F-box domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_07042 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Nitrariaceae Nitraria sibirica 7 evm.TU.LG08.537, evm.TU.LG11.863, evm.TU.LG12.619 ...
evm.TU.LG12.693, evm.TU.LG12.694, evm.TU.LG12.695, evm.TU.LG12.939
Salicaceae Populus euphratica 1 populus_peu26090
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