Basic Information
Locus ID:
evm.TU.LG12.613
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 17019308 | 17022281 | + | evm.TU.LG12.613 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 62,775.47 Da | 40.94 | 85.45 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 40 | 121 | 1.2E-15 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 317 | 510 | 2.6E-27 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 177 | 234 | 2.5E-9 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 316 | 532 | 1.89E-50 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 133 | 236 | 4.0E-20 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 319 | 523 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 125 | 1.3E-18 | IPR038408 |
| SMART | SM00220 | serkin_6 | 270 | 512 | 2.6E-8 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 143 | 517 | 23.326059 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 131 | 236 | 17.756145 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 125 | 17.475531 | IPR002902 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 362 | 374 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_024950644.2 | cysteine-rich receptor-like protein kinase 10 [Citrus sinensis] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5N1X5 | Cysteine-rich receptor-like protein kinase 10 OS=Citrus unshiu OX=55188 GN=CUMW_010360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.610, evm.TU.LG12.613 |