Basic Information
Locus ID:
evm.TU.LG12.610
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 16990935 | 16993978 | + | evm.TU.LG12.610 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 50,228.73 Da | 40.88 | 83.44 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 269 | 392 | 7.1E-9 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 23 | 102 | 1.0E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 189 | 424 | 3.32E-40 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 256 | 435 | 4.4E-21 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 10 | 108 | 8.6E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 178 | 255 | 3.6E-19 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 9 | 115 | 16.18108 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 110 | 401 | 9.460607 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 451 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_024950644.2 | cysteine-rich receptor-like protein kinase 10 [Citrus sinensis] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2H5N1X5 | Cysteine-rich receptor-like protein kinase 10 OS=Citrus unshiu OX=55188 GN=CUMW_010360 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG12.610, evm.TU.LG12.613 |