Basic Information
Locus ID:
evm.TU.LG12.581
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 16516531 | 16519530 | + | evm.TU.LG12.581 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.68 | 50,289.67 Da | 41.94 | 80.40 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 150 | 244 | 1.7E-13 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 127 | 3.4E-17 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 295 | 364 | 4.76E-11 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 353 | 434 | 7.72E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 277 | 366 | 4.5E-20 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 29 | 130 | 5.2E-21 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 246 | 3.8E-22 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 130 | 18.190645 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 136 | 246 | 17.39406 | IPR002902 |
| ProSitePatterns | PS00092 | N-6 Adenine-specific DNA methylases signature. | 24 | 30 | - | IPR002052 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 256 | 280 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_031279173.1 | cysteine-rich receptor-like protein kinase 10 [Pistacia vera] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | V4TPB4 | Receptor-like protein kinase At4g00960 OS=Citrus clementina OX=85681 GN=CICLE_v10017818mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 4 | jg21923, jg21925, jg21927, jg581 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1555 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G1737 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.581 |
| Salicaceae | Populus euphratica | 1 | populus_peu10241 |