Basic Information
Locus ID:
evm.TU.LG12.502
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 15363486 | 15375453 | + | evm.TU.LG12.502 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.28 | 190,699.63 Da | 44.35 | 112.20 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 436 | 496 | 4.5E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 826 | 926 | 1.3E-13 | IPR001245 |
| Pfam | PF00560 | Leucine Rich Repeat | 637 | 657 | 1.2 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 909 | 948 | 6.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 170 | 229 | 3.7E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1492 | 1551 | 2.1E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 291 | 351 | 8.8E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1315 | 1375 | 8.0E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1143 | 1181 | 2.5E-6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1025 | 1084 | 5.0E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 69 | 1.7E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 564 | 624 | 2.8E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 1252 | 1563 | 2.89E-45 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 403 | 732 | 2.98E-56 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 422 | 9.42E-60 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 802 | 910 | 9.14E-25 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 921 | 1279 | 1.43E-67 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 506 | 754 | 6.1E-67 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1386 | 1567 | 1.5E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 295 | 505 | 9.1E-54 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 238 | 6.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1022 | 1119 | 1.3E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1120 | 1385 | 3.4E-66 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 909 | 1021 | 1.1E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 239 | 293 | 5.9E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 143 | 3.7E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 804 | 897 | 3.7E-26 | - |
| SMART | SM00369 | LRR_typ_2 | 1442 | 1465 | 92.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1265 | 1289 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1120 | 1144 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 72.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 707 | 730 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 975 | 999 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 563 | 586 | 31.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 483 | 503 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 338 | 362 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1168 | 1191 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1023 | 1047 | 26.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 386 | 409 | 100.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1217 | 1240 | 210.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1071 | 1097 | 13.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1023 | 1044 | 700.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1514 | 1535 | 130.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1145 | 1167 | 120.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 168 | 189 | 200.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1442 | 1471 | 260.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 999 | 1018 | 340.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 386 | 412 | 150.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 587 | 613 | 630.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 192 | 218 | 55.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1047 | 1066 | 170.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1144 | 1170 | 30.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1393 | 1419 | 540.0 | - |
| SMART | SM00369 | LRR_typ_2 | 192 | 216 | 8.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 168 | 191 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 241 | 265 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 635 | 659 | 0.61 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1466 | 1490 | 27.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1071 | 1095 | 24.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1217 | 1241 | 33.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 587 | 611 | 8.2 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1192 | 1216 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1514 | 1537 | 0.074 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 683 | 706 | 83.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 635 | 656 | 380.0 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1516 | 1537 | 8.158596 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 822 | 1093 | 10.874006 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 1194 | 1215 | 7.095899 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 828 | 850 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24130.1 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_024953027.2 | probable LRR receptor-like serine/threonine-protein kinase At3g47570, partial [Citrus sinensis] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067GNG4 | Protein kinase domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0052782mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology