Basic Information
Locus ID:
evm.TU.LG12.496
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 22302356 | 22311599 | + | evm.TU.LG12.496 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 23,664.19 Da | 22.54 | 93.46 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 8 | 35 | 0.042 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 49 | 82 | 3.8E-4 | IPR001680 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 107 | 153 | 2.11E-6 | IPR011009 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 8 | 97 | 5.92E-21 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 2 | 107 | 2.0E-25 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 108 | 185 | 8.8E-6 | - |
| SMART | SM00320 | WD40_4 | 2 | 38 | 0.53 | IPR001680 |
| SMART | SM00320 | WD40_4 | 44 | 83 | 5.9E-7 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 51 | 84 | 11.418318 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 6 | 47 | 12.413288 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 51 | 92 | 14.251289 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 6 | 40 | 10.15287 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_002521318.1 | putative receptor-like protein kinase At1g72540 [Ricinus communis] | 0 |
| Q9CAH1 | Putative receptor-like protein kinase At1g72540 OS=Arabidopsis thaliana OX=3702 GN=At1g72540 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5N6QKM7 | Protein kinase domain-containing protein OS=Carpinus fangiana OX=176857 GN=FH972_003526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Dunaliellaceae | Dunaliella salina | 1 | Dusal.0061s00007.v1.0 |
| Portulacaceae | Portulaca oleracea | 3 | evm.TU.LG05.1266, evm.TU.LG12.496, evm.TU.LG19.367 |