Basic Information
Locus ID:
evm.TU.LG12.345
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Receptor protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 16467261 | 16473501 | + | evm.TU.LG12.345 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 107,907.72 Da | 36.04 | 104.55 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 296 | 355 | 1.2E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 74 | 2.2E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 695 | 967 | 7.5E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 464 | 520 | 6.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 967 | 2.7E-74 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 82 | 404 | 6.36E-62 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 393 | 621 | 1.43E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 147 | 232 | 2.6E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 233 | 341 | 2.5E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 146 | 2.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 342 | 635 | 4.0E-85 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 660 | 768 | 2.8E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 769 | 971 | 1.8E-58 | - |
| SMART | SM00369 | LRR_typ_2 | 318 | 341 | 360.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 7.6 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 270 | 294 | 180.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 557 | 581 | 280.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 694 | 967 | 5.7E-29 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 485 | 509 | 3.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 172 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 180.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 694 | 968 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 813 | 825 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G75820.1 | Leucine-rich receptor-like protein kinase family protein. Putative receptor kinase with an extracellular leucine-rich domain. Controls shoot and floral meristem size, and contributes to establish and maintain floral meristem identity. Negatively regulated by KAPP (kinase-associated protein phosphatase). CLV3 peptide binds directly CLV1 ectodomain. | 0 |
| RefSeq | XP_021755306.1 | receptor protein kinase CLAVATA1-like [Chenopodium quinoa] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803N6X2 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology