Basic Information
Locus ID:
evm.TU.LG12.314
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 11260553 | 11262328 | - | evm.TU.LG12.314 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 65,271.45 Da | 31.98 | 106.01 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13906 | C-terminus of AA_permease | 515 | 564 | 6.6E-18 | IPR029485 |
| Pfam | PF13520 | Amino acid permease | 77 | 458 | 2.5E-43 | IPR002293 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 71 | 504 | 8.4E-92 | - |
| PIRSF | PIRSF006060 | AA_transporter | 54 | 581 | 9.4E-67 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G34960.1 | cationic amino acid transporter 5. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. Localized to the plasma membrane. | 0 |
| RefSeq | XP_031269417.1 | cationic amino acid transporter 5-like [Pistacia vera] | 0 |
| O64759 | Cationic amino acid transporter 5 OS=Arabidopsis thaliana OX=3702 GN=CAT5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R6QAP1 | Cationic amino acid transporter like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc20817 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology