Basic Information
Locus ID:
evm.TU.LG12.267
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 10425077 | 10432169 | + | evm.TU.LG12.267 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.56 | 107,332.62 Da | 35.20 | 97.06 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 229 | 251 | 1.6 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 325 | 382 | 8.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 690 | 960 | 4.5E-47 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 446 | 468 | 1.4 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 253 | 312 | 2.4E-8 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 106 | 124 | 0.6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 38 | 77 | 3.9E-5 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 306 | 438 | 5.83E-23 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 684 | 962 | 2.7E-75 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 561 | 1.33E-65 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 765 | 1.2E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 766 | 972 | 2.9E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 188 | 7.0E-39 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 618 | 2.5E-88 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 295 | 2.0E-34 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 227 | 251 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 492 | 516 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 154 | 177 | 330.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 178 | 202 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 348 | 370 | 93.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 275 | 299 | 58.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 323 | 347 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 688 | 962 | 1.1E-33 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 419 | 443 | 230.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 349 | 370 | 7.257614 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 972 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 810 | 822 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G20270.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. | 0 |
| RefSeq | XP_031256061.1 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Pistacia vera] | 0 |
| O65440 | Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 OS=Arabidopsis thaliana OX=3702 GN=BAM3 PE=1 SV=3 | 0 | |
| TrEMBL | A0A067GBX9 | Protein kinase domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g012213mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology