Basic Information
Locus ID:
evm.TU.LG12.1748
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Hippocampus abundant transcript 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 41376408 | 41380090 | - | evm.TU.LG12.1748 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 48,983.17 Da | 38.30 | 103.59 | 0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 22 | 434 | 1.32846E-56 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 22 | 394 | 1.4E-26 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 22 | 430 | 1.7E-35 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 19 | 431 | 2.3E-38 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_004291324.1 | PREDICTED: uncharacterized protein LOC101296167 [Fragaria vesca subsp. vesca] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9CPM9 | MFS domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology