Basic Information
Locus ID:
evm.TU.LG12.1653
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
strubbelig-receptor family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 40500048 | 40505522 | - | evm.TU.LG12.1653 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 76,523.46 Da | 41.92 | 90.75 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 414 | 678 | 8.4E-40 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 70 | 1.9E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 392 | 678 | 2.87E-69 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 28 | 234 | 1.16E-39 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 379 | 487 | 5.3E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 254 | 2.2E-49 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 489 | 702 | 2.2E-54 | - |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 191 | 213 | 7.072797 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 411 | 681 | 34.067902 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 165 | 178 | 3.8E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 144 | 157 | 3.8E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 689 | 708 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 245 | 281 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_021761852.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like [Chenopodium quinoa] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZV23 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology