Basic Information
Locus ID:
evm.TU.LG12.1495
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 38207306 | 38211369 | - | evm.TU.LG12.1495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.11 | 47,268.60 Da | 58.41 | 55.76 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 406 | 429 | 1.1E-6 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 232 | 288 | 3.9E-27 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 229 | 290 | 3.01E-27 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 397 | 427 | 2.22E-9 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 392 | 439 | 7.2E-15 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 216 | 291 | 4.3E-30 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 1.1E-39 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 405 | 435 | 7.3E-4 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 232 | 290 | 25.315762 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 400 | 439 | 15.881341 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 35 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 379 | 393 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 378 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 276 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 227 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 210 | 235 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 261 | 393 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G03340.1 | WRKY DNA-binding protein 3. Encodes WRKY DNA-binding protein 3 (WRKY3). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9ZQ70 | Probable WRKY transcription factor 3 OS=Arabidopsis thaliana OX=3702 GN=WRKY3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9DC04 | WRKY transcription factor 3 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology