Basic Information
Locus ID:
evm.TU.LG12.1393
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr12 | 37005389 | 37013057 | + | evm.TU.LG12.1393 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 56,797.78 Da | 46.20 | 77.64 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04601 | Domain of unknown function (DUF569) | 210 | 349 | 4.1E-69 | IPR007679 |
| Pfam | PF04601 | Domain of unknown function (DUF569) | 1 | 143 | 3.4E-49 | IPR007679 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 214 | 354 | 1.31E-25 | IPR008999 |
| SUPERFAMILY | SSF50405 | Actin-crosslinking proteins | 7 | 146 | 2.19E-16 | IPR008999 |
| Gene3D | G3DSA:2.80.10.50 | - | 5 | 131 | 4.0E-10 | - |
| Gene3D | G3DSA:2.80.10.50 | - | 218 | 349 | 6.1E-18 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 387 | 417 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G27100.1 | Actin cross-linking protein. | 0 |
| RefSeq | XP_021731141.1 | uncharacterized protein LOC110698043 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C8ZKK4 | DUF569 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology