Basic Information
Locus ID:
evm.TU.LG12.1254
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Disease resistance protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 23830848 | 23839933 | + | evm.TU.LG12.1254 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 182,719.88 Da | 40.41 | 100.65 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00931 | NB-ARC domain | 166 | 383 | 1.6E-43 | IPR002182 |
| SUPERFAMILY | SSF52047 | RNI-like | 1262 | 1537 | 2.75E-17 | - |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 146 | 411 | 4.67E-49 | IPR027417 |
| SUPERFAMILY | SSF52047 | RNI-like | 876 | 1108 | 6.28E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 527 | 855 | 5.26E-24 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1192 | 1388 | 2.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1399 | 1591 | 5.1E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1002 | 1181 | 4.9E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 506 | 953 | 7.9E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.8.430 | - | 315 | 400 | 8.8E-14 | IPR042197 |
| Gene3D | G3DSA:3.40.50.300 | - | 139 | 312 | 3.5E-34 | IPR027417 |
| PRINTS | PR00364 | Disease resistance protein signature | 180 | 195 | 7.5E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 616 | 632 | 7.5E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 348 | 362 | 7.5E-20 | - |
| PRINTS | PR00364 | Disease resistance protein signature | 255 | 269 | 7.5E-20 | - |
| Coils | Coil | Coil | 29 | 63 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G27190.1 | NB-ARC domain-containing disease resistance protein. | 0 |
| RefSeq | XP_052297535.1 | disease resistance protein At4g27190-like [Citrus sinensis] | 0 |
| Q9T048 | Disease resistance protein At4g27190 OS=Arabidopsis thaliana OX=3702 GN=At4g27190 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7IXP6 | NB-ARC domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002497 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology