Basic Information
Locus ID:
evm.TU.LG12.1224
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 23552445 | 23553954 | + | evm.TU.LG12.1224 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.69 | 30,963.14 Da | 46.06 | 96.78 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 4 | 237 | 2.0E-30 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 240 | 6.47E-47 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 247 | 1.6E-51 | - |
| PIRSF | PIRSF000654 | ILK | 3 | 253 | 6.9E-23 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 239 | 27.651064 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07650.4 | - | 0 |
| RefSeq | XP_052288259.1 | probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X4 [Citrus sinensis] | 0 |
| C0LGE0 | Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana OX=3702 GN=At1g07650 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5PXK4 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_176700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Anacardiaceae | Pistacia vera | 8 | pistato.v30065220, pistato.v30065230, pistato.v30067340 ... |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.1224 |