Basic Information
Locus ID:
evm.TU.LG12.1142
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG12 | 22726153 | 22729275 | + | evm.TU.LG12.1142 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.80 | 55,435.64 Da | 36.37 | 92.91 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 31 | 350 | 5.2E-74 | IPR000490 |
| Pfam | PF07983 | X8 domain | 368 | 439 | 1.1E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 31 | 350 | 2.53E-80 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 30 | 357 | 3.4E-106 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 361 | 474 | 8.8E-12 | - |
| SMART | SM00768 | X8_cls | 367 | 452 | 1.4E-52 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 265 | 278 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_006467418.1 | glucan endo-1,3-beta-glucosidase 1 [Citrus sinensis] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A067GS81 | glucan endo-1,3-beta-D-glucosidase OS=Citrus sinensis OX=2711 GN=CISIN_1g010394mg PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology