Basic Information
Locus ID:
evm.TU.LG11.993
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
beta-N-acetylhexosaminidase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 34569530 | 34571916 | + | evm.TU.LG11.993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.50 | 36,371.24 Da | 49.12 | 63.82 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00325 | chitinase_GH19 | 87 | 320 | 1.43901E-107 | - |
| CDD | cd06921 | ChtBD1_GH19_hevein | 23 | 61 | 1.18254E-15 | - |
| Pfam | PF00182 | Chitinase class I | 88 | 320 | 1.0E-118 | IPR000726 |
| Pfam | PF00187 | Chitin recognition protein | 23 | 61 | 8.8E-13 | IPR001002 |
| SUPERFAMILY | SSF57016 | Plant lectins/antimicrobial peptides | 23 | 71 | 4.45E-12 | IPR036861 |
| SUPERFAMILY | SSF53955 | Lysozyme-like | 83 | 327 | 2.17E-99 | IPR023346 |
| Gene3D | G3DSA:3.30.20.10 | Endochitinase, domain 2 | 169 | 227 | 1.5E-112 | - |
| Gene3D | G3DSA:3.30.60.10 | - | 21 | 63 | 3.5E-17 | IPR036861 |
| Gene3D | G3DSA:1.10.530.10 | - | 91 | 326 | 1.5E-112 | - |
| SMART | SM00270 | ChitinBD_3 | 23 | 61 | 1.1E-15 | IPR001002 |
| PIRSF | PIRSF001060 | Endochitinase | 1 | 327 | 1.0E-114 | IPR016283 |
| ProSiteProfiles | PS50941 | Chitin-binding type-1 domain profile. | 21 | 63 | 10.532792 | IPR001002 |
| ProSitePatterns | PS00774 | Chitinases family 19 signature 2. | 231 | 241 | - | IPR000726 |
| ProSitePatterns | PS00026 | Chitin recognition or binding domain signature. | 33 | 52 | - | IPR018371 |
| ProSitePatterns | PS00773 | Chitinases family 19 signature 1. | 104 | 126 | - | IPR000726 |
| PRINTS | PR00451 | Chitin-binding domain signature | 46 | 53 | 9.7E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 39 | 46 | 9.7E-6 | IPR001002 |
| PRINTS | PR00451 | Chitin-binding domain signature | 31 | 39 | 9.7E-6 | IPR001002 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12500.1 | basic chitinase. encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. | 0 |
| RefSeq | XP_021610905.1 | probable inactive chitinase-like protein LaCIC [Manihot esculenta] | 0 |
| Q949H3 | Inactive chitinase-like protein 1 OS=Hevea brasiliensis OX=3981 GN=CHI-L1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9ET77 | Chitinase (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology