Basic Information
Locus ID:
evm.TU.LG11.559
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Small ubiquitinrelated modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 14004298 | 14005923 | + | evm.TU.LG11.559 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 9,378.52 Da | 33.09 | 66.99 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 2 | 64 | 2.2E-12 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 2 | 69 | 1.35E-14 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 72 | 1.4E-20 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 1 | 69 | 9.634824 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_051134892.1 | small ubiquitin-related modifier 1-like [Andrographis paniculata] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A4KTB4 | Small ubiquitin-related modifier (Fragment) OS=Rhododendron williamsianum OX=262921 GN=C3L33_22080 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology