Basic Information
Locus ID:
evm.TU.LG11.550
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 24607231 | 24608735 | + | evm.TU.LG11.550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.25 | 27,771.53 Da | 57.61 | 66.60 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 97 | 199 | 9.4E-46 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 98 | 191 | 1.28E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 94 | 204 | 1.1E-39 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 99 | 192 | 21.24456 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 54 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 41 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14550.2 | - | 0 |
| RefSeq | XP_021731927.1 | auxin-responsive protein IAA1-like [Chenopodium quinoa] | 0 |
| Q5VRD1 | Auxin-responsive protein IAA1 OS=Oryza sativa subsp. japonica OX=39947 GN=IAA1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LEK0 | Auxin-responsive protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology