Basic Information
Locus ID:
evm.TU.LG11.434
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Kelch motif
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 8453489 | 8454808 | + | evm.TU.LG11.434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 49,436.07 Da | 57.95 | 65.90 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 193 | 238 | 7.8E-10 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 146 | 189 | 7.4E-5 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 115 | 294 | 1.16E-35 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 11 | 65 | 6.02E-7 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 86 | 330 | 5.4E-34 | IPR015915 |
| SMART | SM00612 | kelc_smart | 205 | 252 | 7.5E-4 | IPR006652 |
| SMART | SM00612 | kelc_smart | 155 | 203 | 2.8E-6 | IPR006652 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 114 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59940.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_006478506.2 | F-box/kelch-repeat protein SKIP20 [Citrus sinensis] | 0 |
| Q9M1Y1 | F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A067DMT1 | F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g013264mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology