Basic Information
Locus ID:
evm.TU.LG11.416
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 18314313 | 18318564 | - | evm.TU.LG11.416 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.41 | 38,278.19 Da | 28.67 | 97.17 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 14 | 169 | 5.55227E-61 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 195 | 351 | 2.49561E-58 | - |
| Pfam | PF00190 | Cupin | 10 | 152 | 2.4E-26 | IPR006045 |
| Pfam | PF00190 | Cupin | 187 | 331 | 2.0E-22 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 9 | 339 | 1.34E-49 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 190 | 353 | 6.3E-42 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 1 | 166 | 3.1E-34 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 186 | 337 | 3.2E-19 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 7 | 153 | 5.0E-27 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 314 | 331 | 3.1E-10 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 256 | 272 | 3.1E-10 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 207 | 227 | 3.1E-10 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 274 | 289 | 3.1E-10 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G07750.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_020215068.1 | 12S seed storage globulin 1 [Cajanus cajan] | 0 |
| A0A222NNM9 | Cocosin 1 OS=Cocos nucifera OX=13894 GN=COS-1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8ZZK3 | Cupin type-1 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology