Basic Information
Locus ID:
evm.TU.LG11.410
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
SEC12-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG11 | 7561405 | 7567739 | - | evm.TU.LG11.410 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 53,268.98 Da | 36.52 | 95.72 | 0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 251 | 273 | 0.063 | IPR001680 |
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 151 | 448 | 1.41E-35 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 143 | 456 | 4.2E-68 | IPR015943 |
| SMART | SM00320 | WD40_4 | 368 | 407 | 26.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 278 | 316 | 2.7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 409 | 450 | 0.55 | IPR001680 |
| SMART | SM00320 | WD40_4 | 236 | 274 | 0.04 | IPR001680 |
| SMART | SM00320 | WD40_4 | 181 | 219 | 73.0 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 291 | 325 | 9.004632 | IPR001680 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50550.1 | Transducin/WD40 repeat-like superfamily protein. | 0 |
| RefSeq | XP_031268785.1 | SEC12-like protein 2 [Pistacia vera] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A5B9G3S1 | Prolactin regulatory element-binding protein OS=Betula platyphylla OX=78630 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology