Basic Information
Locus ID:
evm.TU.LG11.1660
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 43095319 | 43096545 | - | evm.TU.LG11.1660 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.05 | 42,049.73 Da | 37.47 | 90.32 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 22 | 61 | 5.2E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 18 | 72 | 8.11E-13 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 64 | 9.2E-7 | - |
| SMART | SM00256 | fbox_2 | 25 | 65 | 1.1E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 105 | 321 | 6.4E-15 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 19 | 65 | 9.576953 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_021858912.1 | F-box/kelch-repeat protein At3g06240-like [Spinacia oleracea] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R497 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_113930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG06.1970, evm.TU.LG11.1517, evm.TU.LG11.1519 ... |