Basic Information
Locus ID:
evm.TU.LG11.1642
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 41995049 | 42001124 | + | evm.TU.LG11.1642 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.28 | 113,064.85 Da | 65.41 | 77.33 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 925 | 966 | 2.43267E-23 | - |
| CDD | cd01989 | STK_N | 21 | 176 | 6.83892E-36 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 649 | 889 | 1.6E-32 | IPR001245 |
| Pfam | PF04564 | U-box domain | 922 | 989 | 5.2E-17 | IPR003613 |
| SUPERFAMILY | SSF57850 | RING/U-box | 921 | 989 | 9.71E-24 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 626 | 891 | 1.26E-56 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 22 | 140 | 1.0E-4 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 921 | 991 | 2.5E-27 | IPR013083 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 615 | 717 | 3.2E-22 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 20 | 150 | 4.2E-5 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 718 | 920 | 1.8E-35 | - |
| SMART | SM00504 | Ubox_2 | 924 | 987 | 4.9E-29 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 645 | 902 | 28.400166 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 920 | 991 | 32.253189 | IPR003613 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 383 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 269 | 284 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 354 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 251 | 268 | - | - |
| Coils | Coil | Coil | 596 | 616 | - | - |
| Coils | Coil | Coil | 512 | 567 | - | - |
| Coils | Coil | Coil | 312 | 366 | - | - |
| Coils | Coil | Coil | 470 | 490 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_010671850.2 | U-box domain-containing protein 33 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9DY10 | Serine/threonine-protein kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology