Basic Information
Locus ID:
evm.TU.LG11.1517
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
21 kDa protein-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 40669358 | 40676697 | - | evm.TU.LG11.1517 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.10 | 85,892.94 Da | 50.33 | 79.38 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15798 | PMEI-like_3 | 610 | 765 | 3.4584E-44 | - |
| CDD | cd15798 | PMEI-like_3 | 431 | 585 | 1.87641E-34 | - |
| Pfam | PF04043 | Plant invertase/pectin methylesterase inhibitor | 607 | 759 | 1.3E-33 | IPR006501 |
| Pfam | PF04043 | Plant invertase/pectin methylesterase inhibitor | 427 | 582 | 1.5E-33 | IPR006501 |
| Pfam | PF00646 | F-box domain | 30 | 66 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 99 | 4.32E-14 | IPR036047 |
| SUPERFAMILY | SSF101148 | Plant invertase/pectin methylesterase inhibitor | 605 | 763 | 2.62E-33 | IPR035513 |
| SUPERFAMILY | SSF101148 | Plant invertase/pectin methylesterase inhibitor | 427 | 585 | 1.19E-31 | IPR035513 |
| Gene3D | G3DSA:1.20.140.40 | Invertase/pectin methylesterase inhibitor family protein | 424 | 586 | 1.3E-35 | IPR035513 |
| Gene3D | G3DSA:1.20.1280.50 | - | 14 | 99 | 6.2E-8 | - |
| Gene3D | G3DSA:1.20.140.40 | Invertase/pectin methylesterase inhibitor family protein | 602 | 763 | 8.7E-36 | IPR035513 |
| SMART | SM00856 | PMEI_2 | 603 | 759 | 1.2E-41 | IPR006501 |
| SMART | SM00256 | fbox_2 | 30 | 70 | 2.3E-7 | IPR001810 |
| SMART | SM00856 | PMEI_2 | 424 | 582 | 2.9E-43 | IPR006501 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 120 | 371 | 2.6E-15 | IPR017451 |
| TIGRFAM | TIGR01614 | PME_inhib: pectinesterase inhibitor domain | 413 | 585 | 3.3E-30 | IPR006501 |
| TIGRFAM | TIGR01614 | PME_inhib: pectinesterase inhibitor domain | 601 | 761 | 4.4E-27 | IPR006501 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 24 | 70 | 8.517177 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| Coils | Coil | Coil | 500 | 523 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G62360.1 | Plant invertase/pectin methylesterase inhibitor superfamily protein. | 0 |
| RefSeq | XP_021842071.1 | 21 kDa protein-like [Spinacia oleracea] | 0 |
| P17407 | 21 kDa protein OS=Daucus carota OX=4039 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0D3BFT6 | PMEI domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 5 | evm.TU.LG06.1970, evm.TU.LG11.1517, evm.TU.LG11.1519 ... |