Basic Information
Locus ID:
evm.TU.LG11.1153
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 36579584 | 36584755 | + | evm.TU.LG11.1153 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 68,289.01 Da | 44.10 | 87.86 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03000 | NPH3 family | 207 | 464 | 4.1E-88 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 2.0E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 17 | 116 | 6.75E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 14 | 148 | 2.5E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 29 | 129 | 5.5E-5 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 207 | 488 | 90.16729 | IPR027356 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 29 | 99 | 12.246789 | IPR000210 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 566 | 618 | - | - |
| Coils | Coil | Coil | 524 | 551 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_021770684.1 | BTB/POZ domain-containing protein At5g03250-like [Chenopodium quinoa] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LSD0 | BTB/POZ domain-containing protein At5g03250-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology