Basic Information
Locus ID:
evm.TU.LG11.1029
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
proteinaceous RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 34995624 | 35006255 | - | evm.TU.LG11.1029 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 66,854.24 Da | 44.22 | 79.81 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 63 | 273 | 6.8E-79 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 314 | 540 | 2.4E-58 | IPR031595 |
| Gene3D | G3DSA:3.40.50.11980 | - | 331 | 506 | 3.3E-218 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 72 | 543 | 3.3E-218 | IPR011990 |
| Coils | Coil | Coil | 54 | 74 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21900.1 | proteinaceous RNase P 3. | 0 |
| RefSeq | XP_021722085.1 | proteinaceous RNase P 2-like isoform X1 [Chenopodium quinoa] | 0 |
| F4JKB6 | Proteinaceous RNase P 3 OS=Arabidopsis thaliana OX=3702 GN=PRORP3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LD46 | ribonuclease P OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology