Basic Information
Locus ID:
evm.TU.LG10.903
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 20908269 | 20911645 | + | evm.TU.LG10.903 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 18,685.01 Da | 69.81 | 76.01 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 18 | 156 | 4.87786E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 19 | 155 | 1.1E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 5 | 161 | 2.49E-64 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 10 | 159 | 5.1E-68 | IPR016135 |
| SMART | SM00212 | ubc_7 | 18 | 161 | 5.4E-69 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 15 | 161 | 60.566891 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 88 | 103 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_027369134.1 | ubiquitin-conjugating enzyme E2 2 isoform X2 [Abrus precatorius] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A371I8N4 | Ubiquitin-conjugating enzyme E2 2 (Fragment) OS=Mucuna pruriens OX=157652 GN=UBC2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology