Basic Information
Locus ID:
evm.TU.LG10.871
Species & Taxonomic ID:
Nitraria sibirica & 357931
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 20557291 | 20561660 | + | evm.TU.LG10.871 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.99 | 62,989.50 Da | 39.95 | 85.00 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 71 | 329 | 5.68995E-141 | - |
| CDD | cd00051 | EFh | 449 | 511 | 8.51753E-19 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 376 | 437 | 1.4E-10 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 74 | 330 | 3.8E-75 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 448 | 511 | 1.5E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 358 | 537 | 1.38E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 53 | 358 | 1.89E-88 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 158 | 339 | 1.1E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 157 | 1.0E-27 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 340 | 514 | 4.9E-53 | - |
| SMART | SM00054 | efh_1 | 485 | 513 | 8.4E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 72 | 330 | 4.3E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 377 | 405 | 1.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 413 | 441 | 0.0032 | IPR002048 |
| SMART | SM00054 | efh_1 | 449 | 477 | 1.1E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 72 | 330 | 49.148876 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 481 | 516 | 14.5413 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 373 | 408 | 15.182896 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 445 | 480 | 14.624987 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 409 | 444 | 10.050141 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 78 | 101 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 422 | 434 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 192 | 204 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 494 | 506 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 458 | 470 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 386 | 398 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_006439667.1 | calcium-dependent protein kinase 10 [Citrus clementina] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | V4THR6 | Calcium-dependent protein kinase 30 OS=Citrus clementina OX=85681 GN=CICLE_v10019541mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology