Basic Information
Locus ID:
evm.TU.LG10.866
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Zinc ion binding
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 20495914 | 20504464 | + | evm.TU.LG10.866 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 145,016.84 Da | 48.57 | 84.41 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16464 | RING-H2_Pirh2 | 1146 | 1189 | 1.9338E-21 | - |
| CDD | cd12108 | Hr-like | 608 | 754 | 2.30606E-20 | - |
| CDD | cd12108 | Hr-like | 37 | 165 | 1.54178E-21 | - |
| Pfam | PF01814 | Hemerythrin HHE cation binding domain | 38 | 166 | 1.3E-8 | IPR012312 |
| Pfam | PF13639 | Ring finger domain | 1145 | 1188 | 4.2E-7 | IPR001841 |
| Pfam | PF05495 | CHY zinc finger | 1018 | 1093 | 1.9E-18 | IPR008913 |
| Pfam | PF14599 | Zinc-ribbon | 1194 | 1251 | 2.7E-25 | IPR039512 |
| SUPERFAMILY | SSF57850 | RING/U-box | 1146 | 1196 | 3.89E-7 | - |
| SUPERFAMILY | SSF161245 | Zinc hairpin stack | 1084 | 1138 | 1.96E-15 | IPR037275 |
| SUPERFAMILY | SSF161219 | CHY zinc finger-like | 1008 | 1074 | 1.96E-16 | IPR037274 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1140 | 1191 | 1.0E-9 | IPR013083 |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 602 | 796 | 4.0E-14 | - |
| Gene3D | G3DSA:2.20.28.10 | - | 1217 | 1253 | 2.1E-17 | - |
| Gene3D | G3DSA:1.20.120.520 | nmb1532 protein domain like | 37 | 187 | 2.1E-19 | - |
| SMART | SM00184 | ring_2 | 1147 | 1188 | 5.7E-5 | IPR001841 |
| ProSiteProfiles | PS51270 | Zinc finger CTCHY-type profile. | 1083 | 1146 | 27.557047 | IPR017921 |
| ProSiteProfiles | PS51266 | Zinc finger CHY-type profile. | 1011 | 1080 | 23.685066 | IPR008913 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 1147 | 1189 | 11.471321 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18910.1 | zinc ion binding;zinc ion binding. | 0 |
| RefSeq | XP_006439671.1 | zinc finger protein BRUTUS-like At1g18910 isoform X1 [Citrus clementina] | 0 |
| F4IDY5 | Zinc finger protein BRUTUS-like At1g18910 OS=Arabidopsis thaliana OX=3702 GN=At1g18910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5C7H1N4 | Zinc finger protein BRUTUS-like At1g18910 OS=Acer yangbiense OX=1000413 GN=EZV62_022926 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology