Basic Information
Locus ID:
evm.TU.LG10.791
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 19649848 | 19653518 | - | evm.TU.LG10.791 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.69 | 26,324.51 Da | 59.61 | 75.06 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 54 | 190 | 3.14944E-52 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 59 | 189 | 1.6E-39 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 51 | 196 | 6.33E-46 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 42 | 209 | 2.3E-50 | IPR016135 |
| SMART | SM00212 | ubc_7 | 51 | 195 | 3.7E-50 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 47 | 195 | 42.079121 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 120 | 136 | - | IPR023313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 231 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G41340.1 | ubiquitin conjugating enzyme 4. Belongs to Ubiquitin conjugating enzyme family. Gene expression is developmentally regulated. | 0 |
| RefSeq | XP_021292280.1 | ubiquitin-conjugating enzyme E2-23 kDa-like isoform X1 [Herrania umbratica] | 0 |
| P16577 | Ubiquitin-conjugating enzyme E2-23 kDa OS=Triticum aestivum OX=4565 GN=UBC4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6A1VMF6 | Ubiquitin-conjugating enzyme E2 5 OS=Morella rubra OX=262757 GN=CJ030_MR5G000215 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology