Basic Information
Locus ID:
evm.TU.LG10.789
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
RING-H2 finger protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 19640368 | 19641471 | - | evm.TU.LG10.789 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 41,189.33 Da | 53.99 | 82.02 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 137 | 180 | 5.8265E-20 | - |
| Pfam | PF13639 | Ring finger domain | 137 | 180 | 2.4E-12 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 115 | 187 | 1.44E-20 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 97 | 184 | 1.4E-20 | IPR013083 |
| SMART | SM00184 | ring_2 | 138 | 179 | 6.6E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 138 | 180 | 11.987676 | IPR001841 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G40250.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_044487591.1 | RING-H2 finger protein ATL46-like [Mangifera indica] | 0 |
| Q9FL07 | RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067FQT4 | RING-type domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g039646mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology