HalophFGD

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Basic Information
Locus ID: evm.TU.LG10.772
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 10643223 10644356 + evm.TU.LG10.772
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.38 22,227.28 Da 36.77 100.72 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07734 F-box associated 43 143 1.3E-8 IPR006527
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 40 146 6.7E-15 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_030963755.1 F-box/kelch-repeat protein At3g06240-like [Quercus lobata] 0
TrEMBL A0A7C9AWL0 F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 1 Ag10G01150
Casuarinaceae Casuarina glauca 1 Cgl02G2813
Portulacaceae Portulaca oleracea 14 evm.TU.LG04.2967, evm.TU.LG04.3108, evm.TU.LG10.771 ...
evm.TU.LG10.772, evm.TU.LG10.773, evm.TU.LG16.1423, evm.TU.LG16.1529, evm.TU.LG16.1553, evm.TU.LG16.484, evm.TU.LG16.485, evm.TU.LG16.486, evm.TU.LG16.499, evm.TU.LG16.500, evm.TU.LG26.134
Tamaricaceae Reaumuria soongarica 1 MSTRG.19897_chr11_+
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.