HalophFGD

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Basic Information
Locus ID: evm.TU.LG10.771
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 10632200 10632658 - evm.TU.LG10.771
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.09 13,660.54 Da 47.99 103.50 0.16
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF08268 F-box associated domain 3 75 7.2E-6 IPR013187
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 2 93 8.0E-11 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_026388929.1 F-box/kelch-repeat protein At3g06240-like [Papaver somniferum] 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Apiaceae Apium graveolens 1 Ag10G01150
Casuarinaceae Casuarina glauca 1 Cgl02G2813
Portulacaceae Portulaca oleracea 14 evm.TU.LG04.2967, evm.TU.LG04.3108, evm.TU.LG10.771 ...
evm.TU.LG10.772, evm.TU.LG10.773, evm.TU.LG16.1423, evm.TU.LG16.1529, evm.TU.LG16.1553, evm.TU.LG16.484, evm.TU.LG16.485, evm.TU.LG16.486, evm.TU.LG16.499, evm.TU.LG16.500, evm.TU.LG26.134
Tamaricaceae Reaumuria soongarica 1 MSTRG.19897_chr11_+
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.