Basic Information
Locus ID:
evm.TU.LG10.511
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
CPK13
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr10 | 6549579 | 6555172 | + | evm.TU.LG10.511 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.10 | 60,808.77 Da | 40.82 | 84.29 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 58 | 316 | 1.53447E-134 | - |
| Pfam | PF13499 | EF-hand domain pair | 363 | 425 | 3.2E-8 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 317 | 2.7E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 435 | 498 | 2.2E-14 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 346 | 524 | 8.39E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 49 | 341 | 1.48E-83 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 60 | 144 | 2.4E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 145 | 325 | 3.3E-61 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 326 | 501 | 2.3E-53 | - |
| SMART | SM00054 | efh_1 | 364 | 392 | 1.4E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 472 | 500 | 1.3E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 59 | 317 | 3.8E-95 | IPR000719 |
| SMART | SM00054 | efh_1 | 436 | 464 | 7.0E-5 | IPR002048 |
| SMART | SM00054 | efh_1 | 400 | 428 | 8.7 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 360 | 395 | 15.657116 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 396 | 431 | 8.264835 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 468 | 503 | 14.06708 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 432 | 467 | 14.959732 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 59 | 317 | 46.562355 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 65 | 88 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 481 | 493 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 179 | 191 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 445 | 457 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 373 | 385 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_028075981.1 | calcium-dependent protein kinase 13 [Camellia sinensis] | 0 |
| Q8W4I7 | Calcium-dependent protein kinase 13 OS=Arabidopsis thaliana OX=3702 GN=CPK13 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C8Z9H2 | Calcium/calmodulin-dependent protein kinase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology