Basic Information
Locus ID:
evm.TU.LG10.1627
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 28111169 | 28119030 | + | evm.TU.LG10.1627 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 104,542.11 Da | 43.84 | 80.83 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 760 | 912 | 1.91315E-56 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 325 | 911 | 7.6E-88 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 44 | 147 | 7.6E-25 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 322 | 914 | 1.0E-111 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 25 | 147 | 2.75E-29 | IPR035927 |
| Gene3D | G3DSA:3.30.2230.10 | - | 9 | 158 | 5.0E-35 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 309 | 521 | 2.2E-69 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 642 | 920 | 2.8E-57 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 159 | 250 | 5.9E-12 | - |
| SMART | SM00695 | dusp | 39 | 149 | 7.0E-31 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 324 | 914 | 59.601528 | IPR028889 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 20 | 146 | 19.084759 | IPR006615 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 856 | 873 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 325 | 340 | - | IPR018200 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G10570.1 | ubiquitin-specific protease 9. encodes a ubiquitin-specific protease family member, UBP9. | 0 |
| RefSeq | XP_031259077.1 | ubiquitin carboxyl-terminal hydrolase 9-like [Pistacia vera] | 0 |
| Q9ZSB5 | Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana OX=3702 GN=UBP10 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2H5PXT7 | Ubiquitin carboxyl-terminal hydrolase OS=Citrus unshiu OX=55188 GN=CUMW_177300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology