Basic Information
Locus ID:
evm.TU.LG10.1612
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 27973153 | 27974421 | + | evm.TU.LG10.1612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 47,766.18 Da | 54.15 | 78.70 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 29 | 76 | 7.7E-9 | IPR025610 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 78 | 171 | 1.1E-23 | IPR025610 |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 247 | 293 | 5.3E-11 | IPR011598 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 246 | 314 | 1.7E-18 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 236 | 309 | 1.6E-17 | IPR036638 |
| SMART | SM00353 | finulus | 250 | 299 | 3.0E-16 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 244 | 293 | 17.161327 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 238 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 215 | 257 | - | - |
| Coils | Coil | Coil | 283 | 310 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00870.1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein. | 0 |
| RefSeq | XP_031262748.1 | transcription factor MYC1-like [Pistacia vera] | 0 |
| O23090 | Transcription factor bHLH14 OS=Arabidopsis thaliana OX=3702 GN=BHLH14 PE=1 SV=1 | 0 | |
| TrEMBL | B9GY36 | BHLH domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_003G147300 PE=4 SV=2 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology