Basic Information
Locus ID:
evm.TU.LG10.1503
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
SPA1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 27044496 | 27050157 | - | evm.TU.LG10.1503 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.03 | 119,250.78 Da | 48.40 | 74.77 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 853 | 889 | 0.1 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 942 | 973 | 0.024 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 821 | 846 | 0.24 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 768 | 1078 | 1.7E-47 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 485 | 595 | 5.88E-11 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 740 | 1081 | 2.3E-122 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 306 | 584 | 5.9E-16 | - |
| SMART | SM00320 | WD40_4 | 1031 | 1079 | 260.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 935 | 973 | 8.0E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 806 | 846 | 0.027 | IPR001680 |
| SMART | SM00320 | WD40_4 | 892 | 931 | 0.27 | IPR001680 |
| SMART | SM00320 | WD40_4 | 984 | 1023 | 19.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 849 | 889 | 7.1E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 757 | 796 | 3.3 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 942 | 975 | 10.653776 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 856 | 898 | 9.439068 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 813 | 855 | 10.274523 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 942 | 975 | 12.814306 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 833 | 847 | - | IPR019775 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 960 | 974 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 833 | 847 | 2.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 876 | 890 | 2.8E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 960 | 974 | 2.8E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 99 | 119 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 637 | 667 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 34 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 152 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 42 | - | - |
| Coils | Coil | Coil | 607 | 634 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11110.1 | SPA1-related 2. Encodes a member of the SPA (suppressor of phyA-105) protein family (SPA1-SPA4). SPA proteins contain an N-terminal serine/threonine kinase-like motif followed by a coiled-coil structure and a C-terminal WD-repeat domain. SPA proteins function redundantly in suppressing photomorphogenesis in dark- and light-grown seedlings. SPA2 primarily regulates seedling development in darkness and has little function in light-grown seedlings or adult plants. | 0 |
| RefSeq | XP_006439401.1 | protein SPA1-RELATED 2 [Citrus clementina] | 0 |
| Q9T014 | Protein SPA1-RELATED 2 OS=Arabidopsis thaliana OX=3702 GN=SPA2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A5C7H1C0 | Protein kinase domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_023155 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology