Basic Information
Locus ID:
evm.TU.LG10.1495
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 27004122 | 27005366 | - | evm.TU.LG10.1495 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.26 | 31,897.45 Da | 36.01 | 87.49 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 12 | 56 | 2.8E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 91 | 2.49E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 88 | 1.2E-9 | - |
| SMART | SM00256 | fbox_2 | 15 | 55 | 2.1E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 9 | 55 | 10.212818 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_047265997.1 | uncharacterized protein LOC107865876 isoform X1 [Capsicum annuum] | 0 |
| TrEMBL | A0A2N9GMX1 | F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 1 | Ag1G01106 |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG01.935, evm.TU.LG10.1495 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00005997 |