HalophFGD

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Basic Information
Locus ID: evm.TU.LG10.1472
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr10 33939859 33941675 + evm.TU.LG10.1472
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.51 52,658.80 Da 40.63 75.88 -0.50
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 66 223 9.8E-10 IPR019557
MobiDBLite mobidb-lite consensus disorder prediction 393 464 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_042510740.1 uncharacterized protein LOC122086086 isoform X2 [Macadamia integrifolia] 0
TrEMBL A0A6P6S3X2 protein MAIN-LIKE 2-like OS=Coffea arabica OX=13443 GN=LOC113687453 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Portulacaceae Portulaca oleracea 40 evm.TU.LG01.1647, evm.TU.LG01.964, evm.TU.LG01.995 ...
evm.TU.LG02.1665, evm.TU.LG02.1887, evm.TU.LG02.2086, evm.TU.LG03.1481, evm.TU.LG03.1584, evm.TU.LG03.2582, evm.TU.LG05.1304, evm.TU.LG05.1469, evm.TU.LG05.2155, evm.TU.LG05.2300, evm.TU.LG06.507, evm.TU.LG06.718, evm.TU.LG06.938, evm.TU.LG07.1205, evm.TU.LG07.1728, evm.TU.LG08.243, evm.TU.LG09.325, evm.TU.LG10.1454, evm.TU.LG10.1472, evm.TU.LG11.100, evm.TU.LG11.198, evm.TU.LG12.177, evm.TU.LG12.74, evm.TU.LG13.1564, evm.TU.LG13.1569, evm.TU.LG13.1658, evm.TU.LG16.1125, evm.TU.LG16.1180, evm.TU.LG16.1181, evm.TU.LG17.1103, evm.TU.LG17.1206, evm.TU.LG21.1256, evm.TU.LG22.1408, evm.TU.LG22.819, evm.TU.LG24.300, evm.TU.LG24.314, evm.TU.LG24.385
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.