Basic Information
Locus ID:
evm.TU.LG10.1472
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
ATPase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 26757623 | 26763294 | - | evm.TU.LG10.1472 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.61 | 93,860.81 Da | 44.45 | 84.80 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 561 | 694 | 3.95806E-24 | - |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 563 | 693 | 1.9E-37 | IPR003959 |
| Pfam | PF17862 | AAA+ lid domain | 717 | 759 | 2.7E-12 | IPR041569 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 94 | 368 | 2.15E-5 | IPR027417 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 522 | 769 | 2.47E-61 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 36 | 356 | 3.3E-5 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 695 | 796 | 8.8E-98 | - |
| Gene3D | G3DSA:3.40.50.300 | - | 522 | 804 | 8.8E-98 | IPR027417 |
| SMART | SM00382 | AAA_5 | 559 | 696 | 1.4E-20 | IPR003593 |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 666 | 685 | - | IPR003960 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 486 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 449 | 509 | - | - |
| Coils | Coil | Coil | 748 | 775 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_031272787.1 | uncharacterized protein LOC116131267 [Pistacia vera] | 0 |
| Q6NW58 | Spastin OS=Danio rerio OX=7955 GN=spast PE=2 SV=2 | 0 | |
| TrEMBL | A0A6J1A2B5 | uncharacterized protein LOC110414430 OS=Herrania umbratica OX=108875 GN=LOC110414430 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology