Basic Information
Locus ID:
evm.TU.LG10.1291
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
S-type anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG10 | 25159487 | 25162684 | - | evm.TU.LG10.1291 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 66,188.38 Da | 48.71 | 82.22 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 212 | 516 | 4.09451E-105 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 213 | 516 | 7.9E-46 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 209 | 527 | 1.2E-67 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 167 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 38 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 37 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 80 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| Coils | Coil | Coil | 19 | 45 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_044486485.1 | guard cell S-type anion channel SLAC1-like [Mangifera indica] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P5C8P7 | Voltage-dependent anion channel OS=Parasponia andersonii OX=3476 GN=PanWU01x14_173560 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology