Basic Information
Locus ID:
evm.TU.LG09.874
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 29714700 | 29719313 | + | evm.TU.LG09.874 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 36,469.82 Da | 37.10 | 90.00 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 18 | 326 | 3.7E-78 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 13 | 330 | 4.45E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 6 | 325 | 6.2E-102 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 4 | 107 | 2.9E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 281 | 334 | 2.0 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 5 | 327 | 47.207668 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_021770317.1 | homocysteine S-methyltransferase 2-like isoform X1 [Chenopodium quinoa] | 0 |
| P56707 | Selenocysteine methyltransferase OS=Astragalus bisulcatus OX=20406 GN=SMTA PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9CI93 | Betaine--homocysteine S-methyltransferase OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology