Basic Information
Locus ID:
evm.TU.LG09.809
Species & Taxonomic ID:
Nitraria sibirica & 357931
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| LG09 | 21998029 | 22003991 | - | evm.TU.LG09.809 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.73 | 93,661.65 Da | 60.02 | 64.06 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16647 | mRING-HC-C3HC5_NEU1 | 779 | 818 | 1.26297E-19 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 777 | 823 | 7.5E-10 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 778 | 824 | 5.01E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 761 | 829 | 1.1E-11 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 779 | 818 | 10.541882 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 673 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 392 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 41 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 488 | 514 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 94 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 341 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 628 | 662 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 96 | 125 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 60 | 134 | - | - |
| Coils | Coil | Coil | 707 | 734 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G27950.1 | Ring/U-Box superfamily protein. | 0 |
| RefSeq | XP_031265538.1 | uncharacterized protein LOC116123907 [Pistacia vera] | 0 |
| Q0MW30 | E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus OX=10090 GN=Neurl1b PE=1 SV=1 | 0 | |
| TrEMBL | A0A5C7IWT2 | RING-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002336 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology