Basic Information
Locus ID:
evm.TU.LG09.595
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
G-type lectin S-receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 23987332 | 23990757 | + | evm.TU.LG09.595 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 84,182.25 Da | 34.41 | 81.82 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01098 | PAN_AP_plant | 338 | 406 | 7.02454E-12 | - |
| CDD | cd00028 | B_lectin | 41 | 187 | 3.48701E-18 | IPR001480 |
| Pfam | PF01453 | D-mannose binding lectin | 109 | 212 | 9.4E-26 | IPR001480 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 591 | 694 | 3.6E-8 | IPR001245 |
| Pfam | PF08276 | PAN-like domain | 364 | 397 | 1.4E-9 | IPR003609 |
| SUPERFAMILY | SSF51110 | alpha-D-mannose-specific plant lectins | 107 | 252 | 5.1E-18 | IPR036426 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 529 | 712 | 3.53E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 566 | 707 | 3.4E-26 | - |
| Gene3D | G3DSA:2.90.10.10 | - | 27 | 184 | 1.6E-12 | IPR036426 |
| SMART | SM00108 | blect_4 | 38 | 187 | 5.1E-11 | IPR001480 |
| SMART | SM00473 | ntp_6 | 338 | 417 | 3.7E-4 | IPR003609 |
| PIRSF | PIRSF000641 | SRK | 6 | 303 | 3.9E-42 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 580 | 742 | 3.4E-45 | IPR024171 |
| PIRSF | PIRSF000641 | SRK | 312 | 584 | 2.7E-34 | IPR024171 |
| ProSiteProfiles | PS50927 | Bulb-type lectin domain profile. | 32 | 179 | 11.213073 | IPR001480 |
| ProSiteProfiles | PS50948 | PAN/Apple domain profile. | 338 | 414 | 8.539499 | IPR003609 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 550 | 572 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G16030.6 | - | 0 |
| RefSeq | XP_010666132.1 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LW83 | G-type lectin S-receptor-like serine/threonine-protein kinase CES101 OS=Arabidopsis thaliana OX=3702 GN=CES101 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0J8B5L4 | Non-specific serine/threonine protein kinase OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_000150 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 6 | jg18161, jg18162, jg18163, jg18164, jg18165, jg23599 |
| Anacardiaceae | Pistacia vera | 10 | pistato.v30014320, pistato.v30036750, pistato.v30036760 ... |
| Apiaceae | Apium graveolens | 1 | AgUnG01050 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G18470.1 |
| Brassicaceae | Brassica nigra | 3 | BniB05g045300.2N, BniB08g009250.2N, BniB08g009270.2N |
| Plantaginaceae | Plantago ovata | 4 | Pov_00016931, Pov_00029256, Pov_00029257, Pov_00041214 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG02.1374, evm.TU.LG02.1375, evm.TU.LG09.595 ... |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_1_RagTag.347, evm.TU.Scaffold_8_RagTag.280 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-3277 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-3165 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-13833 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-21937 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-16308 |
| Salicaceae | Populus euphratica | 5 | populus_peu00251, populus_peu00252, populus_peu00253 ... |
| Solanaceae | Lycium barbarum | 2 | gene-LOC132635386, gene-LOC132637212 |